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题名Immune gene patterns and characterization of the tumor immune microenvironment associated with cancer immunotherapy efficacy
作者
发表日期2023-03-01
发表期刊Heliyon
ISSN/eISSN2405-8440
卷号9期号:3
摘要

Although immunotherapy has revolutionized cancer management, most patients do not derive benefits from it. Aiming to explore an appropriate strategy for immunotherapy efficacy prediction, we collected 6251 patients’ transcriptome data from multicohort population and analyzed the data using a machine learning algorithm. In this study, we found that patients from three immune gene clusters had different overall survival when treated with immunotherapy (P < 0.001), and that these clusters had differential states of hypoxia scores and metabolism functions. The immune gene score showed good immunotherapy efficacy prediction (AUC was 0.737 at 20 months), which was well validated. The immune gene score, tumor mutation burden, and long non-coding RNA score were further combined to build a tumor immune microenvironment signature, which correlated more strongly with overall survival (AUC, 0.814 at 20 months) than when using a single variable. Thus, we recommend using the characterization of the tumor immune microenvironment associated with immunotherapy efficacy via a multi-omics analysis of cancer.

关键词Cancer Immunotherapy Machine learning Tumor immune microenvironment
DOI10.1016/j.heliyon.2023.e14450
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语种英语English
Scopus入藏号2-s2.0-85150341302
引用统计
被引频次:2[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符https://repository.uic.edu.cn/handle/39GCC9TT/10286
专题理工科技学院
通讯作者Yu, Yunfang
作者单位
1.Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation,Department of Medical Oncology,Breast Tumor Centre,Phase I Clinical Trial Centre,Medical Research Center,Sun Yat-sen Memorial Hospital of Sun Yat-sen University,Guangzhou,China
2.Department of Oncology,Zhujiang Hospital of Southern Medical University,Guangzhou,China
3.Department of Medical Oncology,Third Affiliated Hospital of Sun Yat-sen University,Guangzhou,China
4.Division of Science and Technology,Beijing Normal University-Hong Kong Baptist University United International College,Hong Kong Baptist University,Zhuhai,China
5.Faculty of Medicine,Macau University of Science and Technology,Taipa, Macao,China
通讯作者单位北师香港浸会大学
推荐引用方式
GB/T 7714
Lin, Lili,Zhang, Wenda,Chen, Yongjianet al. Immune gene patterns and characterization of the tumor immune microenvironment associated with cancer immunotherapy efficacy[J]. Heliyon, 2023, 9(3).
APA Lin, Lili., Zhang, Wenda., Chen, Yongjian., Ren, Wei., Zhao, Jianli., .. & Yu, Yunfang. (2023). Immune gene patterns and characterization of the tumor immune microenvironment associated with cancer immunotherapy efficacy. Heliyon, 9(3).
MLA Lin, Lili,et al."Immune gene patterns and characterization of the tumor immune microenvironment associated with cancer immunotherapy efficacy". Heliyon 9.3(2023).
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