发表状态 | 已发表Published |
题名 | Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach |
作者 | |
发表日期 | 2023-12-01 |
发表期刊 | Computation
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卷号 | 11期号:12 |
摘要 | This study introduces a mathematical model for electrolytic chemical reactions, employing an energy variation approach grounded in classical thermodynamics. Our model combines electrostatics and chemical reactions within well-defined energetic and dissipative functionals. Extending the energy variation method to open systems consisting of charge, mass, and energy inputs, this model explores energy transformation from one form to another. Electronic devices and biological channels and transporters are open systems. By applying this generalized approach, we investigate the conversion of an electrical current to a proton flow by cytochrome c oxidase, a vital mitochondrial enzyme contributing to ATP production, the ‘energetic currency of life’. This model shows how the enzyme’s structure directs currents and mass flows governed by energetic and dissipative functionals. The interplay between electron and proton flows, guided by Kirchhoff’s current law within the mitochondrial membrane and the mitochondria itself, determines the function of the systems, where electron flows are converted into proton flows and gradients. This important biological system serves as a practical example of the use of energy variation methods to deal with electrochemical reactions in open systems. We combine chemical reactions and Kirchhoff’s law in a model that is much simpler to implement than a full accounting of all the charges in a chemical system. |
关键词 | cytochrome c oxidase electric static mass action proton pump |
DOI | 10.3390/computation11120253 |
URL | 查看来源 |
收录类别 | ESCI |
语种 | 英语English |
WOS研究方向 | Research Areas ; Mathematics |
WOS类目 | Mathematics, Interdisciplinary Applications |
WOS记录号 | WOS:001131398500001 |
Scopus入藏号 | 2-s2.0-85180704652 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | https://repository.uic.edu.cn/handle/39GCC9TT/11076 |
专题 | 北师香港浸会大学 |
通讯作者 | Huang, Huaxiong |
作者单位 | 1.Zu Chongzhi Center for Mathematics and Computational Sciences,Duke Kunshan University,Kunshan,8 Duke Ave,215316,China 2.Department of Applied Mathematics,Illinois Institute of Technology,Chicago,60616,United States 3.Department of Physiology and Biophysics,Rush University,Chicago,60612,United States 4.Math and Statistics Department,Utah State University,Logan,Old Main Hill,84322,United States 5.Research Center for Mathematics,Advanced Institute of Natural Sciences,Beijing Normal University,Zhuhai,519088,China 6.Guangdong Provincial Key Laboratory of Interdisciplinary Research and Application for Data Science,BNU-HKBU United International College,Zhuhai,519088,China 7.Laboratory of Mathematics and Complex Systems,MOE,Beijing Normal University,Beijing,100875,China 8.Department of Mathematics and Statistics,York University,Toronto,M3J 1P3,Canada |
通讯作者单位 | 北师香港浸会大学 |
推荐引用方式 GB/T 7714 | Xu, Shixin,Eisenberg, Robert,Song, Zilonget al. Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach[J]. Computation, 2023, 11(12). |
APA | Xu, Shixin, Eisenberg, Robert, Song, Zilong, & Huang, Huaxiong. (2023). Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach. Computation, 11(12). |
MLA | Xu, Shixin,et al."Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach". Computation 11.12(2023). |
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