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题名Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach
作者
发表日期2023-12-01
发表期刊Computation
卷号11期号:12
摘要

This study introduces a mathematical model for electrolytic chemical reactions, employing an energy variation approach grounded in classical thermodynamics. Our model combines electrostatics and chemical reactions within well-defined energetic and dissipative functionals. Extending the energy variation method to open systems consisting of charge, mass, and energy inputs, this model explores energy transformation from one form to another. Electronic devices and biological channels and transporters are open systems. By applying this generalized approach, we investigate the conversion of an electrical current to a proton flow by cytochrome c oxidase, a vital mitochondrial enzyme contributing to ATP production, the ‘energetic currency of life’. This model shows how the enzyme’s structure directs currents and mass flows governed by energetic and dissipative functionals. The interplay between electron and proton flows, guided by Kirchhoff’s current law within the mitochondrial membrane and the mitochondria itself, determines the function of the systems, where electron flows are converted into proton flows and gradients. This important biological system serves as a practical example of the use of energy variation methods to deal with electrochemical reactions in open systems. We combine chemical reactions and Kirchhoff’s law in a model that is much simpler to implement than a full accounting of all the charges in a chemical system.

关键词cytochrome c oxidase electric static mass action proton pump
DOI10.3390/computation11120253
URL查看来源
收录类别ESCI
语种英语English
WOS研究方向Research Areas ; Mathematics
WOS类目Mathematics, Interdisciplinary Applications
WOS记录号WOS:001131398500001
Scopus入藏号2-s2.0-85180704652
引用统计
被引频次:3[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符https://repository.uic.edu.cn/handle/39GCC9TT/11076
专题北师香港浸会大学
通讯作者Huang, Huaxiong
作者单位
1.Zu Chongzhi Center for Mathematics and Computational Sciences,Duke Kunshan University,Kunshan,8 Duke Ave,215316,China
2.Department of Applied Mathematics,Illinois Institute of Technology,Chicago,60616,United States
3.Department of Physiology and Biophysics,Rush University,Chicago,60612,United States
4.Math and Statistics Department,Utah State University,Logan,Old Main Hill,84322,United States
5.Research Center for Mathematics,Advanced Institute of Natural Sciences,Beijing Normal University,Zhuhai,519088,China
6.Guangdong Provincial Key Laboratory of Interdisciplinary Research and Application for Data Science,BNU-HKBU United International College,Zhuhai,519088,China
7.Laboratory of Mathematics and Complex Systems,MOE,Beijing Normal University,Beijing,100875,China
8.Department of Mathematics and Statistics,York University,Toronto,M3J 1P3,Canada
通讯作者单位北师香港浸会大学
推荐引用方式
GB/T 7714
Xu, Shixin,Eisenberg, Robert,Song, Zilonget al. Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach[J]. Computation, 2023, 11(12).
APA Xu, Shixin, Eisenberg, Robert, Song, Zilong, & Huang, Huaxiong. (2023). Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach. Computation, 11(12).
MLA Xu, Shixin,et al."Mathematical Model for Chemical Reactions in Electrolytes Applied to Cytochrome c Oxidase: An Electro-Osmotic Approach". Computation 11.12(2023).
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