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题名Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing
作者
发表日期2024-03-01
发表期刊MedComm
ISSN/eISSN2688-2663
卷号5期号:3
摘要

The exact function of M1 macrophages and CXCL9 in forecasting the effectiveness of immune checkpoint inhibitors (ICIs) is still not thoroughly investigated. We investigated the potential of M1 macrophage and C-X-C Motif Chemokine Ligand 9 (CXCL9) as predictive markers for ICI efficacy, employing a comprehensive approach integrating multicohort analysis and single-cell RNA sequencing. A significant correlation between high M1 macrophage and improved overall survival (OS) and objective response rate (ORR) was found. M1 macrophage expression was most pronounced in the immune-inflamed phenotype, aligning with increased expression of immune checkpoints. Furthermore, CXCL9 was identified as a key marker gene that positively correlated with M1 macrophage and response to ICIs, while also exhibiting associations with immune-related pathways and immune cell infiltration. Additionally, through exploring RNA epigenetic modifications, we identified Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3G (APOBEC3G) as linked to ICI response, with high expression correlating with improved OS and immune-related pathways. Moreover, a novel model based on M1 macrophage, CXCL9, and APOBEC3G-related genes was developed using multi-level attention graph neural network, which showed promising predictive ability for ORR. This study illuminates the pivotal contributions of M1 macrophages and CXCL9 in shaping an immune-active microenvironment, correlating with enhanced ICI efficacy. The combination of M1 macrophage, CXCL9, and APOBEC3G provides a novel model for predicting clinical outcomes of ICI therapy, facilitating personalized immunotherapy.

关键词Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3G (APOBEC3G) C-X-C Motif Chemokine Ligand 9 (CXCL9) immune checkpoint inhibitors M1 macrophage multi-level attention graph neural network tumor immune microenvironment
DOI10.1002/mco2.471
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收录类别ESCI
语种英语English
WOS研究方向Research & Experimental Medicine
WOS类目Medicine, Research & Experimental
WOS记录号WOS:001176077900001
Scopus入藏号2-s2.0-85186446666
引用统计
被引频次:8[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符https://repository.uic.edu.cn/handle/39GCC9TT/11491
专题北师香港浸会大学
通讯作者Zhang, Kang
作者单位
1.Faculty of Medicine,Macau University of Science and Technology,Macao
2.Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation,Guangdong-Hong Kong Joint Laboratory for RNA Medicine,Department of Medical Oncology,Breast Tumor Centre,Phase I Clinical Trial Centre,Sun Yat-sen Memorial Hospital,Sun Yat-sen University,Guangzhou,China
3.Faculty of Sustainable Development,Macau University of Science and Technology,Macao
4.Guangzhou National Laboratory,Guangzhou,China
5.School of Medicine,Guilin Medical University,Guilin,China
6.Division of Science and Technology,Beijing Normal University-Hong Kong Baptist University United International College,Zhuhai,China
7.Faculty of Innovation Engineering,Macau University of Science and Technology,Macao
8.South China Institute of Biomedine,Guangzhou,China
9.Zhuhai International Eve Center,Zhuhai People's Hospital and the First Affiliated Hospital of Faculty of Medicine,Macau University of Science and Technology and University Hospital,Zhuhai,China
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GB/T 7714
Yu, Yunfang,Chen, Haizhu,Ouyang, Wenhaoet al. Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing[J]. MedComm, 2024, 5(3).
APA Yu, Yunfang., Chen, Haizhu., Ouyang, Wenhao., Zeng, Jin., Huang, Hong., .. & Zhang, Kang. (2024). Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing. MedComm, 5(3).
MLA Yu, Yunfang,et al."Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing". MedComm 5.3(2024).
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