发表状态 | 已发表Published |
题名 | Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing |
作者 | |
发表日期 | 2024-03-01 |
发表期刊 | MedComm
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ISSN/eISSN | 2688-2663 |
卷号 | 5期号:3 |
摘要 | The exact function of M1 macrophages and CXCL9 in forecasting the effectiveness of immune checkpoint inhibitors (ICIs) is still not thoroughly investigated. We investigated the potential of M1 macrophage and C-X-C Motif Chemokine Ligand 9 (CXCL9) as predictive markers for ICI efficacy, employing a comprehensive approach integrating multicohort analysis and single-cell RNA sequencing. A significant correlation between high M1 macrophage and improved overall survival (OS) and objective response rate (ORR) was found. M1 macrophage expression was most pronounced in the immune-inflamed phenotype, aligning with increased expression of immune checkpoints. Furthermore, CXCL9 was identified as a key marker gene that positively correlated with M1 macrophage and response to ICIs, while also exhibiting associations with immune-related pathways and immune cell infiltration. Additionally, through exploring RNA epigenetic modifications, we identified Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3G (APOBEC3G) as linked to ICI response, with high expression correlating with improved OS and immune-related pathways. Moreover, a novel model based on M1 macrophage, CXCL9, and APOBEC3G-related genes was developed using multi-level attention graph neural network, which showed promising predictive ability for ORR. This study illuminates the pivotal contributions of M1 macrophages and CXCL9 in shaping an immune-active microenvironment, correlating with enhanced ICI efficacy. The combination of M1 macrophage, CXCL9, and APOBEC3G provides a novel model for predicting clinical outcomes of ICI therapy, facilitating personalized immunotherapy. |
关键词 | Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3G (APOBEC3G) C-X-C Motif Chemokine Ligand 9 (CXCL9) immune checkpoint inhibitors M1 macrophage multi-level attention graph neural network tumor immune microenvironment |
DOI | 10.1002/mco2.471 |
URL | 查看来源 |
收录类别 | ESCI |
语种 | 英语English |
WOS研究方向 | Research & Experimental Medicine |
WOS类目 | Medicine, Research & Experimental |
WOS记录号 | WOS:001176077900001 |
Scopus入藏号 | 2-s2.0-85186446666 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | https://repository.uic.edu.cn/handle/39GCC9TT/11491 |
专题 | 北师香港浸会大学 |
通讯作者 | Zhang, Kang |
作者单位 | 1.Faculty of Medicine,Macau University of Science and Technology,Macao 2.Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation,Guangdong-Hong Kong Joint Laboratory for RNA Medicine,Department of Medical Oncology,Breast Tumor Centre,Phase I Clinical Trial Centre,Sun Yat-sen Memorial Hospital,Sun Yat-sen University,Guangzhou,China 3.Faculty of Sustainable Development,Macau University of Science and Technology,Macao 4.Guangzhou National Laboratory,Guangzhou,China 5.School of Medicine,Guilin Medical University,Guilin,China 6.Division of Science and Technology,Beijing Normal University-Hong Kong Baptist University United International College,Zhuhai,China 7.Faculty of Innovation Engineering,Macau University of Science and Technology,Macao 8.South China Institute of Biomedine,Guangzhou,China 9.Zhuhai International Eve Center,Zhuhai People's Hospital and the First Affiliated Hospital of Faculty of Medicine,Macau University of Science and Technology and University Hospital,Zhuhai,China |
推荐引用方式 GB/T 7714 | Yu, Yunfang,Chen, Haizhu,Ouyang, Wenhaoet al. Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing[J]. MedComm, 2024, 5(3). |
APA | Yu, Yunfang., Chen, Haizhu., Ouyang, Wenhao., Zeng, Jin., Huang, Hong., .. & Zhang, Kang. (2024). Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing. MedComm, 5(3). |
MLA | Yu, Yunfang,et al."Unraveling the role of M1 macrophage and CXCL9 in predicting immune checkpoint inhibitor efficacy through multicohort analysis and single-cell RNA sequencing". MedComm 5.3(2024). |
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