科研成果详情

发表状态已发表Published
题名Fragment-pair based drug molecule solubility prediction through attention mechanism
作者
发表日期2023
发表期刊Frontiers in Pharmacology
卷号14
摘要

The purpose of drug discovery is to identify new drugs, and the solubility of drug molecules is an important physicochemical property in medicinal chemistry, that plays a crucial role in drug discovery. In solubility prediction, high-precision computational methods can significantly reduce the experimental costs and time associated with drug development. Therefore, artificial intelligence technologies have been widely used for solubility prediction. This study utilized the attention layer in mechanism in the deep learning model to consider the atomic-level features of the molecules, and used gated recurrent neural networks to aggregate vectors between layers. It also utilized molecular fragment technology to divide the complete molecule into pairs of fragments, extracted characteristics from each fragment pair, and finally fused the characteristics to predict the solubility of drug molecules. We compared and evaluated our method with five existing models using two performance evaluation indicators, demonstrating that our method has better performance and greater robustness.

关键词attention mechanism drug discovery drug molecules fragments solubility prediction
DOI10.3389/fphar.2023.1255181
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收录类别SCIE
语种英语English
WOS研究方向Pharmacology & Pharmacy
WOS类目Pharmacology & Pharmacy
WOS记录号WOS:001087842600001
Scopus入藏号2-s2.0-85174906242
引用统计
文献类型期刊论文
条目标识符https://repository.uic.edu.cn/handle/39GCC9TT/13010
专题理工科技学院
通讯作者Lei, Xiujuan
作者单位
1.School of Computer Science,Shaanxi Normal University,Xi’an,China
2.Computer Science Department,BNU-HKBU United International College,Zhuhai,China
3.Faculty of Computer Science and Control Engineering,Shenzhen Institute of Advanced Technology,Chinese Academy of Sciences,Shenzhen,China
4.Shenzhen Key Laboratory of Intelligent Bioinformatics,Shenzhen Institute of Advanced Technology,Shenzhen,China
推荐引用方式
GB/T 7714
Liu, Jianping,Lei, Xiujuan,Ji, Chunyanet al. Fragment-pair based drug molecule solubility prediction through attention mechanism[J]. Frontiers in Pharmacology, 2023, 14.
APA Liu, Jianping, Lei, Xiujuan, Ji, Chunyan, & Pan, Yi. (2023). Fragment-pair based drug molecule solubility prediction through attention mechanism. Frontiers in Pharmacology, 14.
MLA Liu, Jianping,et al."Fragment-pair based drug molecule solubility prediction through attention mechanism". Frontiers in Pharmacology 14(2023).
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