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Status已发表Published
TitleDeep learning for denoising in a Mueller matrix microscope
Creator
Date Issued2022-06-01
Source PublicationBiomedical Optics Express
ISSN2156-7085
Volume13Issue:6Pages:3535-3551
Abstract

The Mueller matrix microscope is a powerful tool for characterizing the microstructural features of a complex biological sample. Performance of a Mueller matrix microscope usually relies on two major specifications: measurement accuracy and acquisition time, which may conflict with each other but both contribute to the complexity and expenses of the apparatus. In this paper, we report a learning-based method to improve both specifications of a Mueller matrix microscope using a rotating polarizer and a rotating waveplate polarization state generator. Low noise data from long acquisition time are used as the ground truth. A modified U-Net structured network incorporating channel attention effectively reduces the noise in lower quality Mueller matrix images obtained with much shorter acquisition time. The experimental results show that using high quality Mueller matrix data as ground truth, such a learning-based method can achieve both high measurement accuracy and short acquisition time in polarization imaging.

DOI10.1364/BOE.457219
URLView source
Indexed BySCIE
Language英语English
WOS Research AreaBiochemistry & Molecular Biology ; Optics ; Radiology, Nuclear Medicine & Medical Imaging
WOS SubjectBiochemical Research Methods ; Optics ; Radiology, Nuclear Medicine & Medical Imaging
WOS IDWOS:000810932700002
Scopus ID2-s2.0-85130923964
Citation statistics
Cited Times:5[WOS]   [WOS Record]     [Related Records in WOS]
Document TypeJournal article
Identifierhttp://repository.uic.edu.cn/handle/39GCC9TT/9839
CollectionBeijing Normal-Hong Kong Baptist University
Corresponding AuthorMa, Hui
Affiliation
1.Shenzhen International Graduate School,Tsinghua University,Shenzhen,518055,China
2.Department of Biomedical Engineering,Tsinghua University,Beijing,100084,China
3.Department of Gynaecology,University of Chinese Academy of Sciences Shenzhen Hospital,Shenzhen,518106,China
4.Guangdong Liss Optical Instrument Co. Ltd.,Guangzhou,510095,China
5.Beijing Normal University,Hong Kong Baptist University United International College,Zhuhai,519085,China
6.Department of Physics,Tsinghua University,Beijing,100084,China
Recommended Citation
GB/T 7714
Yang, Xiongjie,Zhao, Qianhao,Huang, Tongyuet al. Deep learning for denoising in a Mueller matrix microscope[J]. Biomedical Optics Express, 2022, 13(6): 3535-3551.
APA Yang, Xiongjie., Zhao, Qianhao., Huang, Tongyu., Hu, Zheng., Bu, Tongjun., .. & Ma, Hui. (2022). Deep learning for denoising in a Mueller matrix microscope. Biomedical Optics Express, 13(6), 3535-3551.
MLA Yang, Xiongjie,et al."Deep learning for denoising in a Mueller matrix microscope". Biomedical Optics Express 13.6(2022): 3535-3551.
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