Status | 已发表Published |
Title | Machine learning based predictive analysis of DNA cleavage induced by diverse nanomaterials |
Creator | |
Date Issued | 2024-12-01 |
Source Publication | Scientific Reports
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ISSN | 2045-2322 |
Volume | 14Issue:1 |
Abstract | DNA cleavage by nanomaterials has the potential to be utilized as an innovative tool for gene editing. Numerous nanomaterials exhibiting DNA cleavage properties have been identified and cataloged. Yet, the exploitation of property data through data-driven machine-learning approaches remains unexplored. A database was developed, compiling thirty distinctive characteristics, encompassing physical and chemical properties, as well as experimental conditions of nanomaterials that have demonstrated DNA cleavage capability such as in articles published over the past two decades. The DNA cleavage effect and efficiency of nanomaterials were predicted using machine learning algorithms such as support vector machines, deep neural networks, and random forest, and a classification accuracy of 0.93 for the cleavage effect was achieved. Moreover, the potential of utilizing larger datasets to enhance the predictive capacity of models was discussed. The findings indicate the feasibility of predicting nanomaterial properties based on experimental data. Evaluating the performance and effectiveness of the machine learning models trained using the existing data can furnish valuable insights for future materials research endeavors, especially for the design of DNA cleavage with specific sites. |
DOI | 10.1038/s41598-024-73140-1 |
URL | View source |
Indexed By | SCIE |
Language | 英语English |
WOS Research Area | Science & Technology - Other Topics |
WOS Subject | Multidisciplinary Sciences |
WOS ID | WOS:001317591600014 |
Scopus ID | 2-s2.0-85204426213 |
Citation statistics | |
Document Type | Journal article |
Identifier | http://repository.uic.edu.cn/handle/39GCC9TT/12060 |
Collection | Beijing Normal-Hong Kong Baptist University |
Corresponding Author | Wu, Pan |
Affiliation | 1.College of Resources and Environmental Engineering,Guizhou University,Guiyang,550025,China 2.Key Laboratory of Karst Georesources and Environment,Ministry of Education,Guiyang,550025,China 3.School of Environment,Jinan University,Guangzhou,510632,China 4.Environmental Science Program,Department of Life Sciences,Beijing Normal University-Hong Kong Baptist University United International College,Zhuhai,No. 2000 Jintong Road, Tangjiawan, Guangdong,519087,China 5.College of Chemistry and Materials Science,Jinan University,Guangzhou,510632,China 6.College of Life Science and Technology,Jinan University,Guangzhou,510632,China |
Recommended Citation GB/T 7714 | Niu, Jie,Wang, Xufeng,Chen, Jianglinget al. Machine learning based predictive analysis of DNA cleavage induced by diverse nanomaterials[J]. Scientific Reports, 2024, 14(1). |
APA | Niu, Jie., Wang, Xufeng., Chen, Jiangling., Zhao, Yingcan., Chen, Xiaohui., .. & Wu, Pan. (2024). Machine learning based predictive analysis of DNA cleavage induced by diverse nanomaterials. Scientific Reports, 14(1). |
MLA | Niu, Jie,et al."Machine learning based predictive analysis of DNA cleavage induced by diverse nanomaterials". Scientific Reports 14.1(2024). |
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